Seita.1G109500.1

Description : cold-responsive mRNA chaperone *(CSD) & RNA chaperone (CSP) of mRNA quality control

Gene families : OG_42_0001475 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001475_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.1G109500.1
Cluster	HCAA Clusters: Cluster_370

Target	Alias	Description	ECC score	Gene Family Method	Actions
Kfl00062_0140	kfl00062_0140_v1....	(p27484\|grp2_nicsy : 110.0) Glycine-rich protein 2 -...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	16Dec
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	231	246
IPR001878	Znf_CCHC	154	170
IPR001878	Znf_CCHC	196	211
IPR001878	Znf_CCHC	122	138
IPR002059	CSP_DNA-bd	8	72

External Links

No external refs found!