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  5. Seita.1G119400.1

Seita.1G119400.1


Description : component *(eL37) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001791 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001791_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G119400.1
Cluster HCAA Clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Bradi3g01190 No alias Zinc-binding ribosomal protein family protein 0.03 Orthogroups_2024-Update
Bradi3g55170 No alias Zinc-binding ribosomal protein family protein 0.05 Orthogroups_2024-Update
Brara.E01589.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.E02541.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.F00200.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.H00172.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Cre10.g430400 No alias Zinc-binding ribosomal protein family protein 0.04 Orthogroups_2024-Update
GRMZM2G168674 No alias Zinc-binding ribosomal protein family protein 0.02 Orthogroups_2024-Update
Glyma.08G205500 No alias Zinc-binding ribosomal protein family protein 0.07 Orthogroups_2024-Update
Glyma.15G015500 No alias Zinc-binding ribosomal protein family protein 0.09 Orthogroups_2024-Update
HORVU4Hr1G065700.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
HORVU6Hr1G090070.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
MA_129829g0010 No alias (at3g16080 : 128.0) Zinc-binding ribosomal protein... 0.07 Orthogroups_2024-Update
Mp2g12400.1 No alias component RPL37 of LSU proteome component 0.1 Orthogroups_2024-Update
PSME_00050791-RA No alias (at3g16080 : 155.0) Zinc-binding ribosomal protein... 0.02 Orthogroups_2024-Update
Pp1s152_133V6 No alias 60s ribosomal protein l37 0.07 Orthogroups_2024-Update
Pp1s222_87V6 No alias 60s ribosomal protein l37 0.05 Orthogroups_2024-Update
Pp1s3_512V6 No alias 60s ribosomal protein l37 0.06 Orthogroups_2024-Update
Pp1s475_18V6 No alias 60s ribosomal protein l37 0.08 Orthogroups_2024-Update
Sobic.001G347901.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Solyc06g066660 No alias Ribosomal protein L37 (AHRD V3.3 *** M1BDD8_SOLTU) 0.05 Orthogroups_2024-Update
Solyc08g068180 No alias Ribosomal protein L37 (AHRD V3.3 *** K4CM42_SOLLC) 0.04 Orthogroups_2024-Update
Sopen06g024930 No alias Ribosomal protein L37e 0.04 Orthogroups_2024-Update
evm.model.tig00020610.80 No alias (at1g52300 : 115.0) Zinc-binding ribosomal protein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001569 Ribosomal_L37e 3 53
No external refs found!