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  5. Seita.1G132100.1

Seita.1G132100.1


Description : unfoldase component *(ClpX) of mitochondrion Clp-type protease complex


Gene families : OG_42_0001441 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001441_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G132100.1
Cluster HCAA Clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
A4A49_14272 No alias clp protease regulatory subunit clpx1, mitochondrial 0.03 Orthogroups_2024-Update
Brara.C01395.1 No alias unfoldase component *(ClpX) of mitochondrion Clp-type... 0.03 Orthogroups_2024-Update
Potri.012G015600 No alias CLP protease regulatory subunit X 0.03 Orthogroups_2024-Update
Pp1s98_222V6 No alias atp-dependent clp protease atp-binding subunit 0.02 Orthogroups_2024-Update
Sobic.004G131040.1 No alias unfoldase component *(ClpX) of mitochondrion Clp-type... 0.03 Orthogroups_2024-Update
Sopen03g023000 No alias AAA domain (Cdc48 subfamily) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 415 487
IPR003959 ATPase_AAA_core 204 408
No external refs found!