Seita.1G144200.1


Description : Unknown function


Gene families : OG_42_0000058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G144200.1
Cluster HCAA Clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Bradi3g30761 No alias RNA-directed DNA polymerase (reverse... 0.03 Orthogroups_2024-Update
HORVU3Hr1G041190.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G061250.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G001830.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G040770.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G078600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G150001.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G011050.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!