1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.1G148000.1

Seita.1G148000.1


Description : Unknown function


Gene families : OG_42_0000045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G148000.1
Cluster HCAA Clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
A4A49_38445 No alias osmotin-like protein 0.03 Orthogroups_2024-Update
A4A49_53085 No alias thaumatin-like protein 1a 0.02 Orthogroups_2024-Update
GRMZM2G374971 No alias osmotin 34 0.04 Orthogroups_2024-Update
HORVU3Hr1G012110.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.001G439200.2 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 31 253
No external refs found!