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  5. Seita.1G169500.1

Seita.1G169500.1


Description : Unknown function


Gene families : OG_42_0000250 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G169500.1
Cluster HCAA Clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
417753 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 Orthogroups_2024-Update
A4A49_36395 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Brara.C03150.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G242300 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 Orthogroups_2024-Update
Glyma.13G042000 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 Orthogroups_2024-Update
Glyma.16G205900 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 73 134
IPR024593 DUF3444 483 689
No external refs found!