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  5. Seita.1G171600.1

Seita.1G171600.1


Description : Unknown function


Gene families : OG_42_0000058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G171600.1
Cluster HCAA Clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Bradi2g13163 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi5g03559 No alias RNA-directed DNA polymerase (reverse... 0.03 Orthogroups_2024-Update
HORVU0Hr1G028920.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU0Hr1G032020.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU0Hr1G035030.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G048790.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G056080.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G083180.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G088300.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G113600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G042690.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G034440.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G043890.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G058540.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g09980 No alias retrotransposon protein, putative, unclassified 0.02 Orthogroups_2024-Update
Seita.3G116900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G008600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!