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  5. Seita.1G175100.1

Seita.1G175100.1


Description : C2H2 subclass IDD transcription factor


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G175100.1
Cluster HCAA Clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
At3g45260 No alias Protein indeterminate-domain 9... 0.03 Orthogroups_2024-Update
Bradi1g68730 No alias indeterminate(ID)-domain 14 0.01 Orthogroups_2024-Update
Brara.B03081.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Brara.G02535.1 No alias C2H2 subclass IDD transcription factor 0.01 Orthogroups_2024-Update
Brara.H02093.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G042666 No alias indeterminate(ID)-domain 4 0.02 Orthogroups_2024-Update
Glyma.08G092300 No alias indeterminate(ID)-domain 14 0.02 Orthogroups_2024-Update
LOC_Os09g38340 No alias ZOS9-17 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_92989g0010 No alias (at1g68130 : 365.0) indeterminate(ID)-domain 14 (IDD14);... 0.01 Orthogroups_2024-Update
Potri.002G263600 No alias indeterminate(ID)-domain 2 0.02 Orthogroups_2024-Update
Potri.005G027200 No alias indeterminate(ID)-domain 2 0.03 Orthogroups_2024-Update
Potri.008G140400 No alias C2H2-like zinc finger protein 0.01 Orthogroups_2024-Update
Sobic.002G293000.2 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!