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  5. Seita.1G180300.1

Seita.1G180300.1


Description : effector protein *(TFL/BFT/CEN)


Gene families : OG_42_0000178 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000178_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G180300.1
Cluster HCAA Clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Glyma.16G151000 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.02 Orthogroups_2024-Update
LOC_Os01g11940 No alias osFTL1 FT-Like1 homologous to Flowering Locus T gene;... 0.02 Orthogroups_2024-Update
PSME_00037040-RA No alias (at1g18100 : 250.0) Encodes a member of the FT and TFL1... 0.02 Orthogroups_2024-Update
Solyc09g009560 No alias Terminal flower 1 (AHRD V3.3 *** A0A172JD62_FRAAN) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008914 PEBP 52 162
No external refs found!