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  5. Seita.1G182300.1

Seita.1G182300.1


Description : Unknown function


Gene families : OG_42_0002453 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002453_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G182300.1
Cluster HCAA Clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
A4A49_42744 No alias f-box protein 0.03 Orthogroups_2024-Update
Potri.004G199300 No alias F-box family protein 0.02 Orthogroups_2024-Update
Sopen11g027420 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!