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  5. Seita.1G186200.1

Seita.1G186200.1


Description : Unknown function


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G186200.1
Cluster HCAA Clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
414754 No alias plant U-box 25 0.04 Orthogroups_2024-Update
A4A49_34426 No alias e3 ubiquitin-protein ligase pub24 0.03 Orthogroups_2024-Update
At1g49780 No alias U-box domain-containing protein 26... 0.03 Orthogroups_2024-Update
At3g18710 No alias RING-type E3 ubiquitin transferase... 0.05 Orthogroups_2024-Update
Bradi3g45380 No alias plant U-box 25 0.03 Orthogroups_2024-Update
Brara.C03011.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C03388.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.D00589.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Cre03.g178550 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G071484 No alias plant U-box 22 0.03 Orthogroups_2024-Update
GRMZM5G811633 No alias plant U-box 26 0.03 Orthogroups_2024-Update
Kfl00073_0300 kfl00073_0300_v1.... (at5g57035 : 216.0) U-box domain-containing protein... 0.02 Orthogroups_2024-Update
LOC_Os03g13740 No alias immediate-early fungal elicitor protein CMPG1, putative,... 0.03 Orthogroups_2024-Update
LOC_Os10g03440 No alias avr9/Cf-9 rapidly elicited protein 74, putative, expressed 0.02 Orthogroups_2024-Update
MA_200041g0010 No alias (at3g19380 : 209.0) plant U-box 25 (PUB25); FUNCTIONS... 0.04 Orthogroups_2024-Update
MA_311559g0010 No alias (at3g52450 : 124.0) Encodes a cytoplasmically localized... 0.04 Orthogroups_2024-Update
MA_6335g0010 No alias "(at5g64660 : 281.0) ""CYS, MET, PRO, and GLY protein... 0.04 Orthogroups_2024-Update
MA_684442g0010 No alias (at3g52450 : 140.0) Encodes a cytoplasmically localized... 0.02 Orthogroups_2024-Update
MA_8030489g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_83739g0020 No alias (at1g49780 : 403.0) plant U-box 26 (PUB26); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00026834-RA No alias (at3g19380 : 258.0) plant U-box 25 (PUB25); FUNCTIONS... 0.08 Orthogroups_2024-Update
PSME_00028678-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00043995-RA No alias (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... 0.05 Orthogroups_2024-Update
PSME_00056761-RA No alias (at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS... 0.02 Orthogroups_2024-Update
Potri.004G140100 No alias plant U-box 26 0.04 Orthogroups_2024-Update
Potri.006G202600 No alias plant U-box 22 0.02 Orthogroups_2024-Update
Pp1s109_251V6 No alias u-box domain-containing protein 0.03 Orthogroups_2024-Update
Seita.7G104100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G075801.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g009330 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen04g026970 No alias U-box domain 0.03 Orthogroups_2024-Update
Sopen11g001970 No alias U-box domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA 16Dec
BP GO:0016567 protein ubiquitination IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 21 89
No external refs found!