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  5. Seita.1G191000.1

Seita.1G191000.1


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G191000.1

Target Alias Description ECC score Gene Family Method Actions
408755 No alias P-glycoprotein 18 0.02 Orthogroups_2024-Update
At4g25960 No alias ABC transporter B family member 2... 0.04 Orthogroups_2024-Update
Bradi2g47330 No alias P-glycoprotein 11 0.02 Orthogroups_2024-Update
Brara.F03055.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Brara.J00114.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Brara.K00467.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
GRMZM5G833207 No alias ATP binding cassette subfamily B4 0.07 Orthogroups_2024-Update
Glyma.13G142100 No alias ATP binding cassette subfamily B1 0.02 Orthogroups_2024-Update
Glyma.13G222000 No alias P-glycoprotein 9 0.03 Orthogroups_2024-Update
Glyma.14G220200 No alias P-glycoprotein 13 0.02 Orthogroups_2024-Update
Glyma.17G041200 No alias P-glycoprotein 11 0.08 Orthogroups_2024-Update
HORVU2Hr1G080200.1 No alias auxin efflux transporter *(ABCB19) & subfamily ABCB transporter 0.03 Orthogroups_2024-Update
HORVU6Hr1G067170.3 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
LOC_Os01g35030 No alias MDR-like ABC transporter, putative, expressed 0.03 Orthogroups_2024-Update
Mp2g11920.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Mp3g11830.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Orthogroups_2024-Update
PSME_00006916-RA No alias (at1g02520 : 643.0) P-glycoprotein 11 (PGP11); FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00021092-RA No alias (at3g28345 : 1204.0) ABC transporter family protein;... 0.02 Orthogroups_2024-Update
PSME_00028351-RA No alias (at1g02520 : 748.0) P-glycoprotein 11 (PGP11); FUNCTIONS... 0.05 Orthogroups_2024-Update
Potri.001G139600 No alias P-glycoprotein 2 0.02 Orthogroups_2024-Update
Potri.015G000200 No alias ATP binding cassette subfamily B19 0.03 Orthogroups_2024-Update
Pp1s121_11V6 No alias multidrug pheromone mdr abc transporter family 0.03 Orthogroups_2024-Update
Sobic.003G281400.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Solyc11g067300 No alias ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR) 0.02 Orthogroups_2024-Update
Sopen02g020400 No alias ABC transporter transmembrane region 0.05 Orthogroups_2024-Update
Sopen08g025270 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update
evm.model.contig_618.5 No alias (at2g47000 : 919.0) Multidrug resistance P-glycoprotein... 0.02 Orthogroups_2024-Update
evm.model.tig00000741.4 No alias (at3g62150 : 432.0) P-glycoprotein 21 (PGP21); FUNCTIONS... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 46 319
IPR011527 ABC1_TM_dom 688 957
IPR003439 ABC_transporter-like 1027 1175
IPR003439 ABC_transporter-like 391 537
No external refs found!