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  5. Seita.1G195400.1

Seita.1G195400.1


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G195400.1
Cluster HCAA Clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
A4A49_29197 No alias ring-h2 finger protein atl73 0.03 Orthogroups_2024-Update
Bradi1g29611 No alias RING-H2 finger A3A 0.05 Orthogroups_2024-Update
Glyma.13G292600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G231900 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Seita.4G173000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.004G251100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G301300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen06g022910 No alias Ring finger domain 0.03 Orthogroups_2024-Update
evm.model.contig_474.3 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 98 141
No external refs found!