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  5. Seita.1G230500.1

Seita.1G230500.1


Description : TCP-type transcription factor


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G230500.1
Cluster HCAA Clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
A4A49_18009 No alias transcription factor tcp4 0.03 Orthogroups_2024-Update
HORVU2Hr1G060120.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G072670.2 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_93117g0010 No alias "(at4g18390 : 115.0) ""TEOSINTE BRANCHED 1, cycloidea... 0.03 Orthogroups_2024-Update
Seita.3G181900.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G064600.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 37 190
No external refs found!