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  5. Seita.1G230900.1

Seita.1G230900.1


Description : cohesin cofactor *(PDS5)


Gene families : OG_42_0000994 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000994_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G230900.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
At1g15940 No alias T24D18.4 [Source:UniProtKB/TrEMBL;Acc:Q9S9P0] 0.03 Orthogroups_2024-Update
At1g80810 No alias Tudor/PWWP/MBT superfamily protein [Source:TAIR;Acc:AT1G80810] 0.03 Orthogroups_2024-Update
Brara.G03699.1 No alias cohesin cofactor *(PDS5) 0.02 Orthogroups_2024-Update
GRMZM2G106308 No alias binding 0.03 Orthogroups_2024-Update
Glyma.04G061700 No alias Function unknown 0.03 Orthogroups_2024-Update
PSME_00006462-RA No alias (at4g31880 : 248.0) LOCATED IN: cytosol; EXPRESSED IN:... 0.03 Orthogroups_2024-Update
Potri.006G004700 No alias binding 0.03 Orthogroups_2024-Update
Potri.006G186700 No alias Function unknown 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!