Seita.1G237900.1

Description : type-II-residues E3 ubiquitin ligase *(PRT1)

Gene families : OG_42_0005766 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005766_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.1G237900.1
Cluster	HCAA Clusters: Cluster_161

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi3g49030	No alias	proteolysis 1	0.02	Orthogroups_2024-Update
Glyma.18G171400	No alias	proteolysis 1	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	16Dec
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Predicted GO
MF	GO:0003951	NAD+ kinase activity	IEP	Predicted GO
BP	GO:0006739	NADP metabolic process	IEP	Predicted GO
BP	GO:0006741	NADP biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000433	Znf_ZZ	276	314
IPR027370	Znf-RING_LisH	170	204

External Links

No external refs found!