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  5. Seita.1G239200.1

Seita.1G239200.1


Description : plant-specific ALOG-type transcription factor


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G239200.1
Cluster HCAA Clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
At5g58500 No alias LSH5 [Source:UniProtKB/TrEMBL;Acc:A0A178U8N9] 0.04 Orthogroups_2024-Update
Brara.B03520.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Brara.C03056.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J01235.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J01236.1 No alias plant-specific ALOG-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G147241 No alias Protein of unknown function (DUF640) 0.08 Orthogroups_2024-Update
Glyma.03G250900 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
HORVU1Hr1G041240.5 No alias plant-specific ALOG-type transcription factor 0.04 Orthogroups_2024-Update
Potri.008G167700 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
Pp1s73_217V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.5G366900.1 No alias plant-specific ALOG-type transcription factor 0.05 Orthogroups_2024-Update
Seita.7G166800.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G222400.1 No alias plant-specific ALOG-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.005G094266.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Solyc05g055020 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.02 Orthogroups_2024-Update
Solyc07g062470 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 33 152
No external refs found!