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  5. Seita.1G240200.1

Seita.1G240200.1


Description : phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase


Gene families : OG_42_0000392 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G240200.1
Cluster HCAA Clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
A4A49_26864 No alias phenylalanine ammonia-lyase 0.03 Orthogroups_2024-Update
Bradi5g15830 No alias PHE ammonia lyase 1 0.04 Orthogroups_2024-Update
GRMZM2G029048 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
GRMZM2G081582 No alias PHE ammonia lyase 1 0.02 Orthogroups_2024-Update
LOC_Os12g33610 No alias phenylalanine ammonia-lyase, putative, expressed 0.03 Orthogroups_2024-Update
MA_123220g0010 No alias (p24481|pal1_petcr : 912.0) Phenylalanine ammonia-lyase... 0.03 Orthogroups_2024-Update
PSME_00011716-RA No alias (at3g10340 : 932.0) Encodes PAL4, a putative a... 0.04 Orthogroups_2024-Update
PSME_00022344-RA No alias (p45733|pal3_tobac : 833.0) Phenylalanine ammonia-lyase... 0.05 Orthogroups_2024-Update
PSME_00022739-RA No alias (at3g10340 : 547.0) Encodes PAL4, a putative a... 0.03 Orthogroups_2024-Update
Potri.010G224200 No alias PHE ammonia lyase 1 0.02 Orthogroups_2024-Update
Potri.016G091100 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
Seita.1G240600.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.04 Orthogroups_2024-Update
Seita.7G168700.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.04 Orthogroups_2024-Update
Sobic.001G160500.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Sobic.004G220300.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Sobic.004G220600.2 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.04 Orthogroups_2024-Update
Sobic.004G220700.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.05 Orthogroups_2024-Update
Sobic.006G148800.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.02 Orthogroups_2024-Update
Solyc09g007910 No alias Phenylalanine ammonia-lyase (AHRD V3.3 *** PAL5_SOLLC) 0.05 Orthogroups_2024-Update
Solyc10g011920 No alias Phenylalanine ammonia-lyase (AHRD V3.3 *** A0A124SBF6_CYNCS) 0.03 Orthogroups_2024-Update
Solyc10g086180 No alias Phenylalanine ammonia-lyase (AHRD V3.3 *** PAL2_TOBAC) 0.03 Orthogroups_2024-Update
Sopen03g021000 No alias Aromatic amino acid lyase 0.02 Orthogroups_2024-Update
Sopen09g002740 No alias Aromatic amino acid lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 50 522
No external refs found!