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  5. Seita.1G250600.1

Seita.1G250600.1


Description : regulatory protein *(LAF1) of phytochrome signalling pathway & MYB class-R2R3 subgroup-16 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G250600.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
39516 No alias myb domain protein 3 0.05 Orthogroups_2024-Update
84195 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
A4A49_01152 No alias transcription factor myb36 0.05 Orthogroups_2024-Update
A4A49_08715 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
A4A49_12817 No alias myb-related protein pp2 0.04 Orthogroups_2024-Update
A4A49_19591 No alias myb-related protein myb4 0.02 Orthogroups_2024-Update
A4A49_20993 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_28008 No alias transcription repressor myb5 0.02 Orthogroups_2024-Update
A4A49_28222 No alias transcription factor rax3 0.04 Orthogroups_2024-Update
A4A49_34201 No alias transcription factor myb82 0.03 Orthogroups_2024-Update
A4A49_35836 No alias transcription factor myb30 0.02 Orthogroups_2024-Update
A4A49_41919 No alias myb-related protein myb4 0.02 Orthogroups_2024-Update
At1g68320 No alias Transcription factor MYB62... 0.04 Orthogroups_2024-Update
At2g32460 No alias Transcription factor MYB101... 0.03 Orthogroups_2024-Update
At3g02940 No alias At3g02940 [Source:UniProtKB/TrEMBL;Acc:Q9LDI5] 0.06 Orthogroups_2024-Update
At3g13540 No alias MYB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAR4] 0.03 Orthogroups_2024-Update
At4g13480 No alias Myb domain protein 79 [Source:UniProtKB/TrEMBL;Acc:Q9T0G9] 0.04 Orthogroups_2024-Update
At5g52260 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5] 0.02 Orthogroups_2024-Update
At5g55020 No alias Transcription factor MYB120... 0.02 Orthogroups_2024-Update
At5g57620 No alias Transcription factor MYB36... 0.03 Orthogroups_2024-Update
Bradi2g36730 No alias myb domain protein 61 0.02 Orthogroups_2024-Update
Bradi2g53010 No alias myb domain protein 33 0.04 Orthogroups_2024-Update
Bradi3g48886 No alias myb domain protein 79 0.04 Orthogroups_2024-Update
Bradi4g04627 No alias myb domain protein 112 0.04 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Bradi4g29796 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
Bradi4g30220 No alias myb domain protein 94 0.06 Orthogroups_2024-Update
Brara.A03667.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Brara.B00568.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.02 Orthogroups_2024-Update
Brara.C03910.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Brara.G02266.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G000818 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
GRMZM2G017268 No alias myb domain protein 93 0.04 Orthogroups_2024-Update
GRMZM2G064744 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
GRMZM2G095904 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
GRMZM2G117244 No alias myb domain protein 68 0.02 Orthogroups_2024-Update
GRMZM2G162709 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
GRMZM2G169356 No alias myb domain protein 20 0.05 Orthogroups_2024-Update
GRMZM2G171781 No alias myb domain protein 61 0.04 Orthogroups_2024-Update
GRMZM2G425427 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.04 Orthogroups_2024-Update
Glyma.02G005600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.04G170100 No alias myb domain protein 94 0.02 Orthogroups_2024-Update
Glyma.04G205100 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.05G109200 No alias myb domain protein 84 0.04 Orthogroups_2024-Update
Glyma.06G103300 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
Glyma.06G300400 No alias myb domain protein 74 0.02 Orthogroups_2024-Update
Glyma.07G073000 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
Glyma.09G235600 No alias myb domain protein 106 0.04 Orthogroups_2024-Update
Glyma.10G273000 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.04 Orthogroups_2024-Update
Glyma.11G194100 No alias myb domain protein 36 0.06 Orthogroups_2024-Update
Glyma.12G066000 No alias myb domain protein 59 0.04 Orthogroups_2024-Update
Glyma.12G104800 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.13G061900 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Glyma.13G066600 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G066800 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.15G144000 No alias myb domain protein 111 0.04 Orthogroups_2024-Update
Glyma.16G073000 No alias myb domain protein 21 0.02 Orthogroups_2024-Update
Glyma.16G189400 No alias myb domain protein 18 0.04 Orthogroups_2024-Update
Glyma.19G224600 No alias myb domain protein 61 0.05 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.04 Orthogroups_2024-Update
HORVU1Hr1G074260.1 No alias MYB class-R2R3 subgroup-4 transcription factor & MYB... 0.05 Orthogroups_2024-Update
HORVU2Hr1G041300.2 No alias MYB class-R2R3 subgroup-11 transcription factor 0.05 Orthogroups_2024-Update
HORVU5Hr1G022690.5 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G083910.2 No alias MYB class-R2R3 subgroup-4 transcription factor 0.05 Orthogroups_2024-Update
HORVU7Hr1G057410.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os01g50720 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g29614 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g33150 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g36730 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10435612g0010 No alias (at5g15310 : 300.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_128244g0010 No alias (at3g61250 : 275.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
MA_246142g0010 No alias (at4g38620 : 256.0) Encodes a R2R3 MYB protein which is... 0.05 Orthogroups_2024-Update
MA_53373g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.04 Orthogroups_2024-Update
MA_9483804g0010 No alias (at5g15310 : 299.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_96853g0010 No alias (p93417|gam1_orysa : 259.0) Transcription factor GAMYB... 0.06 Orthogroups_2024-Update
PSME_00001482-RA No alias (at4g22680 : 248.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00010370-RA No alias (at5g62470 : 192.0) Encodes a R2R3 type Myb... 0.04 Orthogroups_2024-Update
PSME_00018495-RA No alias (at3g02940 : 176.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00021445-RA No alias (at1g22640 : 169.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00022392-RA No alias (at3g13540 : 238.0) Encodes a member of the MYB family... 0.06 Orthogroups_2024-Update
PSME_00023605-RA No alias (p20026|myb1_horvu : 272.0) Myb-related protein Hv1 -... 0.03 Orthogroups_2024-Update
PSME_00026563-RA No alias (at1g22640 : 191.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00031159-RA No alias (at4g38620 : 228.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00035153-RA No alias (at3g02940 : 237.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00039314-RA No alias "(at3g49690 : 223.0) ""Putative homolog of the Blind... 0.04 Orthogroups_2024-Update
PSME_00039845-RA No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00040036-RA No alias (at5g55020 : 216.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00041772-RA No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.05 Orthogroups_2024-Update
PSME_00043973-RA No alias (at1g22640 : 191.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00045448-RA No alias (at4g38620 : 253.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
PSME_00050182-RA No alias (p10290|mybc_maize : 191.0) Anthocyanin regulatory C1... 0.04 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051333-RA No alias (at1g68320 : 167.0) putative transcription factor:... 0.02 Orthogroups_2024-Update
PSME_00051633-RA No alias (at3g61250 : 281.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.04 Orthogroups_2024-Update
PSME_00052005-RA No alias (at3g02940 : 213.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.04 Orthogroups_2024-Update
Potri.001G099800 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Potri.001G139900 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
Potri.001G267300 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Potri.001G346600 No alias myb domain protein 21 0.02 Orthogroups_2024-Update
Potri.001G408700 No alias MYB-like 102 0.02 Orthogroups_2024-Update
Potri.003G079100 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.003G132000 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.04 Orthogroups_2024-Update
Potri.008G180800 No alias myb domain protein 40 0.04 Orthogroups_2024-Update
Potri.009G018700 No alias myb domain protein 33 0.03 Orthogroups_2024-Update
Potri.012G084100 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
Potri.012G140700 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
Potri.013G056400 No alias myb domain protein 5 0.04 Orthogroups_2024-Update
Potri.013G149100 No alias myb domain protein 15 0.05 Orthogroups_2024-Update
Potri.015G041100 No alias myb domain protein 3 0.04 Orthogroups_2024-Update
Potri.017G086300 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Potri.019G118900 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Seita.2G286400.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G132600.1 No alias transcriptional regulator *(MS188) & transcriptional... 0.04 Orthogroups_2024-Update
Sobic.002G279100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G273800.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.04 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G131400.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Solyc02g088190 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRK4_SALMI) 0.02 Orthogroups_2024-Update
Solyc02g091980 No alias blind-like7 0.03 Orthogroups_2024-Update
Solyc06g005330 No alias R2R3MYB transcription factor 59 0.05 Orthogroups_2024-Update
Solyc07g053230 No alias R2R3MYB transcription factor 83 0.03 Orthogroups_2024-Update
Solyc08g065910 No alias blind-like5 0.05 Orthogroups_2024-Update
Solyc10g005460 No alias MYB transcription factor (AHRD V3.3 *** A0A0U3IU11_MESCR) 0.06 Orthogroups_2024-Update
Solyc10g055410 No alias R2R3MYB transcription factor 32 0.02 Orthogroups_2024-Update
Solyc11g069030 No alias blind 0.04 Orthogroups_2024-Update
Solyc11g072060 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PSR6_SALMI) 0.04 Orthogroups_2024-Update
Sopen06g027120 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen10g001440 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 15 62
IPR001005 SANT/Myb 69 113
No external refs found!