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  5. Seita.1G254200.1

Seita.1G254200.1


Description : iron chelator transporter *(YSL) & ferric cation-chelator transporter *(YSL)


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G254200.1
Cluster HCAA Clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Bradi5g17220 No alias YELLOW STRIPE like 3 0.02 Orthogroups_2024-Update
Bradi5g17230 No alias YELLOW STRIPE like 2 0.02 Orthogroups_2024-Update
GRMZM5G893444 No alias YELLOW STRIPE like 7 0.03 Orthogroups_2024-Update
HORVU2Hr1G120250.1 No alias iron chelator transporter *(YSL) & ferric... 0.05 Orthogroups_2024-Update
HORVU7Hr1G097350.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
MA_10429029g0010 No alias (at5g53550 : 696.0) YELLOW STRIPE like 3 (YSL3);... 0.04 Orthogroups_2024-Update
PSME_00036873-RA No alias (at1g65730 : 901.0) Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00044922-RA No alias (at1g65730 : 907.0) Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Pp1s2_335V6 No alias oligopeptide transporter opt family 0.02 Orthogroups_2024-Update
Seita.1G244400.1 No alias iron chelator transporter *(YSL) & ferric... 0.05 Orthogroups_2024-Update
Seita.7G075600.1 No alias iron chelator transporter *(YSL) & ferric... 0.04 Orthogroups_2024-Update
Seita.7G075800.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Solyc03g031920 No alias Oligopeptide transporter, putative (AHRD V3.3 *** B9SIR4_RICCO) 0.02 Orthogroups_2024-Update
Solyc08g083060 No alias Yellow stripe-like transporter 1 (AHRD V3.3 *** T1Q4G6_ARAHY) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 44 622
No external refs found!