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  5. Seita.1G257600.1

Seita.1G257600.1


Description : subgroup ERF-IX transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G257600.1
Cluster HCAA Clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
At2g31230 No alias Ethylene-responsive transcription factor 15... 0.03 Orthogroups_2024-Update
Brara.A01769.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Brara.B03778.1 No alias subgroup ERF-X transcription factor 0.04 Orthogroups_2024-Update
Brara.E02969.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Brara.I01983.1 No alias subgroup ERF-IX transcription factor 0.05 Orthogroups_2024-Update
Brara.K00718.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.09 Orthogroups_2024-Update
GRMZM2G066158 No alias ERF domain protein 12 0.04 Orthogroups_2024-Update
Glyma.13G304300 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
HORVU0Hr1G018240.1 No alias subgroup ERF-III transcription factor 0.04 Orthogroups_2024-Update
HORVU0Hr1G030500.1 No alias subgroup ERF-III transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G062940.1 No alias subgroup ERF-III transcription factor 0.04 Orthogroups_2024-Update
Potri.002G141200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s30_284V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G169400.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
Solyc01g065980 No alias Ethylene Response Factor E.4 0.03 Orthogroups_2024-Update
Solyc05g051200 No alias ethylene-responsive factor 1 0.03 Orthogroups_2024-Update
Sopen07g028150 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen08g026670 No alias AP2 domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 145 195
No external refs found!