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  5. Seita.1G268600.1

Seita.1G268600.1


Description : C2H2 subclass IDD transcription factor


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G268600.1
Cluster HCAA Clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Bradi1g71330 No alias C2H2-like zinc finger protein 0.04 Orthogroups_2024-Update
Brara.H02093.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.I02041.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.I04981.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Glyma.07G158200 No alias indeterminate(ID)-domain 4 0.02 Orthogroups_2024-Update
Potri.010G099100 No alias indeterminate(ID)-domain 5 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0034508 centromere complex assembly IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 88 110
No external refs found!