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  5. Seita.1G272000.1

Seita.1G272000.1


Description : ROP-activating protein *(RopGAP)


Gene families : OG_42_0000700 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000700_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G272000.1
Cluster HCAA Clusters:
Cluster_221

Target Alias Description ECC score Gene Family Method Actions
Brara.F00519.1 No alias ROP-activating protein *(RopGAP) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000095 CRIB_dom 103 132
IPR000198 RhoGAP_dom 166 300
No external refs found!