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At4g13280


Description : (Z)-gamma-bisabolene synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0J9]


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g13280
Cluster HCCA clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g31430 No alias terpene synthase, N-terminal domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g27070 No alias terpene synthase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g27790 No alias terpene synthase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.007G074400 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Potri.011G142800 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Seita.6G048900.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Sobic.007G055700.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 22 199
IPR005630 Terpene_synthase_metal-bd 394 465
IPR005630 Terpene_synthase_metal-bd 230 389
No external refs found!