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  5. Seita.1G280200.1

Seita.1G280200.1


Description : Unknown function


Gene families : OG_42_0000241 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G280200.1
Cluster HCAA Clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Brara.H00910.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G136443 No alias ubiquitin-specific protease 17 0.03 Orthogroups_2024-Update
GRMZM2G447056 No alias ubiquitin-specific protease 23 0.03 Orthogroups_2024-Update
Glyma.02G203500 No alias ubiquitin-specific protease 23 0.02 Orthogroups_2024-Update
Glyma.06G286400 No alias ubiquitin-specific protease 15 0.02 Orthogroups_2024-Update
Glyma.17G074200 No alias ubiquitin-specific protease 23 0.04 Orthogroups_2024-Update
MA_127745g0010 No alias (at5g57990 : 238.0) Encodes a ubiquitin-specific... 0.03 Orthogroups_2024-Update
PSME_00004345-RA No alias (at5g57990 : 289.0) Encodes a ubiquitin-specific... 0.03 Orthogroups_2024-Update
PSME_00025066-RA No alias (at4g02050 : 355.0) sugar transporter protein 7 (STP7);... 0.03 Orthogroups_2024-Update
Potri.011G095200 No alias ubiquitin-specific protease 15 0.03 Orthogroups_2024-Update
Pp1s180_64V6 No alias F28M20.140; ubiquitin carboxyl-terminal hydrolase family... 0.02 Orthogroups_2024-Update
Solyc08g048410 No alias Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD... 0.02 Orthogroups_2024-Update
evm.model.tig00000734.7 No alias (at5g57990 : 155.0) Encodes a ubiquitin-specific... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEA 16Dec
BP GO:0016579 protein deubiquitination IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 203 506
No external refs found!