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  5. Seita.1G280600.1

Seita.1G280600.1


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G280600.1
Cluster HCAA Clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
123915 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update
139408 No alias P-glycoprotein 20 0.03 Orthogroups_2024-Update
176522 No alias ATP binding cassette subfamily B4 0.04 Orthogroups_2024-Update
408755 No alias P-glycoprotein 18 0.04 Orthogroups_2024-Update
92485 No alias ATP binding cassette subfamily B19 0.02 Orthogroups_2024-Update
A4A49_01823 No alias putative abc transporter b family member 8 0.03 Orthogroups_2024-Update
At1g28010 No alias ABC transporter B family member 14... 0.03 Orthogroups_2024-Update
At3g62150 No alias ABC transporter B family member 21... 0.03 Orthogroups_2024-Update
GRMZM2G167658 No alias ATP binding cassette subfamily B19 0.03 Orthogroups_2024-Update
GRMZM5G843537 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update
Glyma.17G041400 No alias P-glycoprotein 11 0.05 Orthogroups_2024-Update
MA_10434957g0010 No alias (at2g36910 : 575.0) Belongs to the family of ATP-binding... 0.03 Orthogroups_2024-Update
MA_18863g0010 No alias (at2g47000 : 769.0) Multidrug resistance P-glycoprotein... 0.04 Orthogroups_2024-Update
PSME_00010270-RA No alias (at1g02520 : 571.0) P-glycoprotein 11 (PGP11); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00016714-RA No alias (q6yuu5|mdr_orysa : 1107.0) Putative multidrug... 0.03 Orthogroups_2024-Update
PSME_00023484-RA No alias (at2g36910 : 1766.0) Belongs to the family of... 0.03 Orthogroups_2024-Update
PSME_00030174-RA No alias (at2g47000 : 1538.0) Multidrug resistance ... 0.03 Orthogroups_2024-Update
PSME_00030389-RA No alias (at4g25960 : 993.0) P-glycoprotein 2 (PGP2); FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.002G187500 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Potri.014G113500 No alias P-glycoprotein 21 0.04 Orthogroups_2024-Update
Potri.018G141400 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
Pp1s29_108V6 No alias multidrug pheromone mdr abc transporter family 0.02 Orthogroups_2024-Update
Seita.3G054200.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Seita.5G283600.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
Sobic.007G163800.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Solyc02g071340 No alias ABC transporter B family protein (AHRD V3.3 *** G7ILW7_MEDTR) 0.05 Orthogroups_2024-Update
Solyc03g005860 No alias ABC transporter B family protein (AHRD V3.3 *** G7ILW7_MEDTR) 0.03 Orthogroups_2024-Update
Sopen06g004020 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update
Sopen07g032260 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update
Sopen08g025270 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 50 316
IPR011527 ABC1_TM_dom 689 959
IPR003439 ABC_transporter-like 1025 1173
IPR003439 ABC_transporter-like 386 535
No external refs found!