1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.1G282500.1

Seita.1G282500.1


Description : UBQ ubiquitin-fold protein


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G282500.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
228943 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
At5g03240 No alias Ubiquitin 4 [Source:UniProtKB/TrEMBL;Acc:A0A1P8BGQ7] 0.04 Orthogroups_2024-Update
Bradi1g32860 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Brara.H01228.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Glyma.07G199900 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Glyma.10G051100 No alias ubiquitin 4 0.03 Orthogroups_2024-Update
Pp1s351_6V6 No alias polyubiquitin containing 7 ubiquitin monomers 0.02 Orthogroups_2024-Update
Seita.5G081000.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Sobic.004G050100.1 No alias UBQ ubiquitin-fold protein 0.05 Orthogroups_2024-Update
Sobic.010G232100.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.010G239500.6 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Solyc07g064130 No alias Polyubiquitin (AHRD V3.3 *** UBI1P_NICSY) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 383 454
IPR000626 Ubiquitin_dom 307 378
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 3 74
No external refs found!