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At4g13340


Description : Leucine-rich repeat extensin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0K5]


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g13340
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
134330 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
412903 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
At1g49490 No alias Leucine-rich repeat (LRR) family protein... 0.04 Orthogroups_2024-Update
Bradi2g05080 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
PSME_00026301-RA No alias (at4g13340 : 513.0) Leucine-rich repeat (LRR) family... 0.03 Orthogroups_2024-Update
Potri.006G152800 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
Seita.3G105100.1 No alias LRR-domain extensin 0.04 Orthogroups_2024-Update
Seita.5G211700.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Sopen06g024030 No alias Leucine Rich Repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 72 105
No external refs found!