1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.1G284700.1

Seita.1G284700.1


Description : component *(uL11) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001717 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001717_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G284700.1
Cluster HCAA Clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
227409 No alias Ribosomal protein L11 family protein 0.18 Orthogroups_2024-Update
A4A49_09340 No alias 60s ribosomal protein l12 0.06 Orthogroups_2024-Update
A4A49_19100 No alias 60s ribosomal protein l12 0.04 Orthogroups_2024-Update
A4A49_58419 No alias 60s ribosomal protein l12 0.13 Orthogroups_2024-Update
AC196489.3_FG002 No alias Ribosomal protein L11 family protein 0.07 Orthogroups_2024-Update
At3g53430 No alias 60S ribosomal Protein L12-like... 0.06 Orthogroups_2024-Update
At5g60670 No alias 60S ribosomal protein L12-3... 0.04 Orthogroups_2024-Update
Bradi3g52460 No alias Ribosomal protein L11 family protein 0.12 Orthogroups_2024-Update
Bradi5g20330 No alias Ribosomal protein L11 family protein 0.1 Orthogroups_2024-Update
Brara.C01863.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Brara.D00531.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Brara.D02258.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.22 Orthogroups_2024-Update
Brara.G01587.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.16 Orthogroups_2024-Update
Brara.I03633.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.J01420.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Cre12.g528750 No alias Ribosomal protein L11 family protein 0.14 Orthogroups_2024-Update
GRMZM2G054201 No alias Ribosomal protein L11 family protein 0.1 Orthogroups_2024-Update
GRMZM2G121075 No alias Ribosomal protein L11 family protein 0.09 Orthogroups_2024-Update
GRMZM2G438814 No alias Ribosomal protein L11 family protein 0.06 Orthogroups_2024-Update
Glyma.10G053100 No alias Ribosomal protein L11 family protein 0.22 Orthogroups_2024-Update
Glyma.11G146300 No alias Ribosomal protein L11 family protein 0.1 Orthogroups_2024-Update
Glyma.12G075500 No alias Ribosomal protein L11 family protein 0.11 Orthogroups_2024-Update
Glyma.13G140100 No alias Ribosomal protein L11 family protein 0.1 Orthogroups_2024-Update
HORVU2Hr1G102610.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
HORVU6Hr1G067870.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Kfl00125_0170 kfl00125_0170_v1.1 (at2g37190 : 245.0) Ribosomal protein L11 family... 0.09 Orthogroups_2024-Update
LOC_Os02g47140 No alias L11 domain containing ribosomal protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g50990 No alias L11 domain containing ribosomal protein, putative, expressed 0.05 Orthogroups_2024-Update
MA_10427147g0010 No alias (at5g60670 : 270.0) Ribosomal protein L11 family... 0.06 Orthogroups_2024-Update
Mp3g02020.1 No alias component RPL12 of LSU proteome component 0.07 Orthogroups_2024-Update
Pp1s104_128V6 No alias 60s ribosomal protein l12 0.24 Orthogroups_2024-Update
Pp1s14_191V6 No alias 60s ribosomal protein l12 0.11 Orthogroups_2024-Update
Pp1s242_7V6 No alias 60s ribosomal protein l12 0.16 Orthogroups_2024-Update
Pp1s280_55V6 No alias 60s ribosomal protein l12 0.1 Orthogroups_2024-Update
Pp1s78_212V6 No alias 60s ribosomal protein l12 0.26 Orthogroups_2024-Update
Seita.7G078800.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Seita.7G222200.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Sobic.004G271400.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Sobic.006G057200.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.2 Orthogroups_2024-Update
Sobic.006G201500.1 No alias component *(uL11) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
Solyc06g075180 No alias 60S ribosomal protein L12 (AHRD V3.3 *** K7WTX4_SOLTU) 0.07 Orthogroups_2024-Update
Solyc11g065670 No alias 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN) 0.24 Orthogroups_2024-Update
Solyc11g069440 No alias 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN) 0.04 Orthogroups_2024-Update
Sopen06g031590 No alias Ribosomal protein L11, N-terminal domain 0.09 Orthogroups_2024-Update
Sopen11g025410 No alias Ribosomal protein L11, N-terminal domain 0.23 Orthogroups_2024-Update
Sopen11g028160 No alias Ribosomal protein L11, N-terminal domain 0.14 Orthogroups_2024-Update
evm.model.contig_2343.1 No alias (at5g60670 : 215.0) Ribosomal protein L11 family... 0.33 Orthogroups_2024-Update
evm.model.tig00001339.27 No alias (at5g60670 : 218.0) Ribosomal protein L11 family... 0.11 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 15 69
IPR020783 Ribosomal_L11_C 75 144
No external refs found!