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  5. Seita.1G286400.1

Seita.1G286400.1


Description : GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G286400.1
Cluster HCAA Clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
A4A49_39609 No alias myb-related protein 2 0.04 Orthogroups_2024-Update
Bradi5g18590 No alias myb-like HTH transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Brara.B02368.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.03 Orthogroups_2024-Update
GRMZM2G090230 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G117193 No alias myb-related protein 1 0.06 Orthogroups_2024-Update
HORVU5Hr1G097900.21 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU7Hr1G090880.3 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Pp1s9_234V6 No alias rolled leaf 9 0.02 Orthogroups_2024-Update
Seita.1G021500.1 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update
Seita.4G175600.1 No alias transcription factor *(CLAUSA) 0.06 Orthogroups_2024-Update
Seita.7G223500.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G519100.1 No alias transcription factor *(CLAUSA) 0.05 Orthogroups_2024-Update
Sopen06g024660 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen10g029340 No alias MYB-CC type transfactor, LHEQLE motif 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 29 79
IPR025756 Myb_CC_LHEQLE 125 169
No external refs found!