Seita.1G290700.1

Description : transcription factor *(DOF)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.1G290700.1
Cluster	HCAA Clusters: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
A4A49_35213	No alias	dof zinc finger protein dof1.7	0.03	Orthogroups_2024-Update
At4g00940	No alias	Dof zinc finger protein DOF4.1...	0.03	Orthogroups_2024-Update
At5g66940	No alias	Dof zinc finger protein DOF5.8...	0.04	Orthogroups_2024-Update
Bradi1g03710	No alias	OBF-binding protein 3	0.04	Orthogroups_2024-Update
Bradi1g73710	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Bradi3g51510	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Brara.B00052.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.D01727.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.E02083.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
Brara.F01753.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.H01965.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.I00088.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.I00873.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Glyma.09G201000	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
LOC_Os03g42200	No alias	dof zinc finger domain containing protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_459791g0010	No alias	(at1g28310 : 129.0) Dof-type zinc finger DNA-binding...	0.03	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
Pp1s26_282V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Seita.2G242400.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.9G206300.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Sobic.001G078700.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Sobic.003G301700.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Sobic.006G182300.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.007G223200.2	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Solyc02g090310	No alias	Dof zinc finger protein (AHRD V3.3 - W9QGW0_9ROSA)	0.05	Orthogroups_2024-Update
Solyc06g076030	No alias	Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU)	0.02	Orthogroups_2024-Update
Sopen02g021750	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update
Sopen03g022580	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen04g026890	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen06g032440	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen08g004350	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Predicted GO
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Predicted GO
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Predicted GO
BP	GO:0009250	glucan biosynthetic process	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predicted GO
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
CC	GO:0044459	plasma membrane part	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
BP	GO:0051273	beta-glucan metabolic process	IEP	Predicted GO
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Predicted GO
CC	GO:0098797	plasma membrane protein complex	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO
CC	GO:1990234	transferase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	57	114

External Links

No external refs found!

Seita.1G290700.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation