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  5. Seita.1G300900.1

Seita.1G300900.1


Description : STAR-type post-transcriptionally regulatory factor


Gene families : OG_42_0000701 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000701_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G300900.1
Cluster HCAA Clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
At5g56140 No alias KH domain-containing protein At5g56140... 0.03 Orthogroups_2024-Update
Bradi1g04120 No alias RNA-binding KH domain-containing protein 0.03 Orthogroups_2024-Update
GRMZM2G108677 No alias RNA-binding KH domain-containing protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G001050.1 No alias STAR-type post-transcriptionally regulatory factor 0.03 Orthogroups_2024-Update
HORVU0Hr1G001300.1 No alias STAR-type post-transcriptionally regulatory factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G069380.3 No alias STAR-type post-transcriptionally regulatory factor 0.03 Orthogroups_2024-Update
LOC_Os05g40290 No alias KH domain-containing protein, putative, expressed 0.03 Orthogroups_2024-Update
Sobic.001G039900.1 No alias STAR-type post-transcriptionally regulatory factor 0.03 Orthogroups_2024-Update
Solyc07g066070 No alias KH domain-containing protein (AHRD V3.3 *** A0A199VDB7_ANACO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR032377 STAR_dimer 35 76
No external refs found!