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  5. Seita.1G302900.1

Seita.1G302900.1


Description : component *(NF-YB) of NF-Y transcription factor complex


Gene families : OG_42_0000232 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000232_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G302900.1
Cluster HCAA Clusters: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
A4A49_02359 No alias nuclear transcription factor y subunit b-3 0.03 Orthogroups_2024-Update
At2g13570 No alias Uncharacterized protein At2g13570 (Fragment)... 0.04 Orthogroups_2024-Update
At5g47640 No alias Nuclear transcription factor Y subunit B-2... 0.03 Orthogroups_2024-Update
Glyma.10G048900 No alias nuclear factor Y, subunit B8 0.02 Orthogroups_2024-Update
HORVU1Hr1G071620.6 No alias component *(NF-YB) of NF-Y transcription factor complex 0.02 Orthogroups_2024-Update
HORVU3Hr1G098500.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G072110.1 No alias transcription factor *(LEC) involved in seed maturation... 0.04 Orthogroups_2024-Update
HORVU7Hr1G105500.6 No alias component *(NF-YB) of NF-Y transcription factor complex 0.02 Orthogroups_2024-Update
LOC_Os01g70890 No alias histone-like transcription factor and archaeal histone,... 0.02 Orthogroups_2024-Update
LOC_Os05g49780 No alias histone-like transcription factor and archaeal histone,... 0.02 Orthogroups_2024-Update
MA_52791g0010 No alias "(at5g47670 : 186.0) Encodes LEC1-Like (L1L), closely... 0.02 Orthogroups_2024-Update
Pp1s302_35V6 No alias ccaat-binding transcription factor subunit 0.02 Orthogroups_2024-Update
Sobic.009G166200.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 63 125
No external refs found!