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  5. Seita.1G303900.1

Seita.1G303900.1


Description : bHLH-type transcription factor


Gene families : OG_42_0001713 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001713_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G303900.1
Cluster HCAA Clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G089501 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Glyma.05G017800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os02g49480 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g29930 No alias transcription factor BIM2, putative, expressed 0.01 Orthogroups_2024-Update
PSME_00001997-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Pp1s211_76V6 No alias transcription factor 0.04 Orthogroups_2024-Update
Seita.6G192000.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Sopen03g033800 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g026630 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 165 214
No external refs found!