1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.1G309600.1

Seita.1G309600.1


Description : MYB class-R2R3 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G309600.1
Cluster HCAA Clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
A4A49_19188 No alias transcription factor laf1 0.02 Orthogroups_2024-Update
A4A49_39488 No alias myb-related protein pp2 0.04 Orthogroups_2024-Update
At1g66230 No alias Transcription factor MYB20... 0.02 Orthogroups_2024-Update
At3g47600 No alias Transcription factor MYB94... 0.04 Orthogroups_2024-Update
Bradi2g17280 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Brara.C01847.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G147346 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Glyma.03G013300 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
Glyma.03G163100 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Glyma.04G170100 No alias myb domain protein 94 0.02 Orthogroups_2024-Update
Glyma.04G205100 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.06G178600 No alias myb domain protein 86 0.05 Orthogroups_2024-Update
Glyma.07G092800 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Glyma.16G007100 No alias myb domain protein 6 0.02 Orthogroups_2024-Update
Glyma.18G095600 No alias myb domain protein 101 0.04 Orthogroups_2024-Update
LOC_Os01g03720 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g39470 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g46610 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
MA_51173g0010 No alias (at5g57620 : 229.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00050445-RA No alias (at5g40350 : 171.0) Myb24 transcription factor. Member... 0.04 Orthogroups_2024-Update
Potri.003G144300 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
Potri.013G130900 No alias myb domain protein 97 0.03 Orthogroups_2024-Update
Sobic.007G138800.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Solyc01g087130 No alias R2R3MYB transcription factor 47 0.03 Orthogroups_2024-Update
Solyc03g116100 No alias R2R3MYB transcription factor 31 0.02 Orthogroups_2024-Update
Sopen08g027720 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 71 111
No external refs found!