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  5. Seita.1G315600.1

Seita.1G315600.1


Description : M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase acting on peptide bond (peptidase)


Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G315600.1
Cluster HCAA Clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Glyma.03G117700 No alias Matrixin family protein 0.04 Orthogroups_2024-Update
Solyc04g005050 No alias matrix metalloproteinase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA 16Dec
BP GO:0006508 proteolysis IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
CC GO:0031012 extracellular matrix IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 167 325
IPR002477 Peptidoglycan-bd-like 68 122
No external refs found!