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  5. Seita.1G323200.1

Seita.1G323200.1


Description : bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase *(BXL) & EC_3.2 glycosylase


Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G323200.1
Cluster HCAA Clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AC234091.1_FG001 No alias Glycosyl hydrolase family protein 0.03 Orthogroups_2024-Update
Bradi4g20197 No alias Glycosyl hydrolase family protein 0.04 Orthogroups_2024-Update
Bradi5g23470 No alias beta-D-xylosidase 4 0.03 Orthogroups_2024-Update
Brara.E02235.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Brara.J02367.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Glyma.05G119900 No alias beta-D-xylosidase 4 0.03 Orthogroups_2024-Update
HORVU2Hr1G115640.11 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
MA_140124g0010 No alias (at5g64570 : 940.0) Encodes a beta-d-xylosidase that... 0.03 Orthogroups_2024-Update
MA_39151g0010 No alias (at1g02640 : 719.0) encodes a protein similar to a... 0.03 Orthogroups_2024-Update
MA_77922g0010 No alias (at5g64570 : 973.0) Encodes a beta-d-xylosidase that... 0.03 Orthogroups_2024-Update
PSME_00001080-RA No alias (at3g19620 : 885.0) Glycosyl hydrolase family protein;... 0.04 Orthogroups_2024-Update
PSME_00023182-RA No alias (at5g10560 : 365.0) Glycosyl hydrolase family protein;... 0.02 Orthogroups_2024-Update
PSME_00030271-RA No alias (at5g64570 : 933.0) Encodes a beta-d-xylosidase that... 0.03 Orthogroups_2024-Update
PSME_00030301-RA No alias (at5g10560 : 197.0) Glycosyl hydrolase family protein;... 0.03 Orthogroups_2024-Update
Solyc01g079570 No alias Beta-D-xylosidase family protein (AHRD V3.3 *** B9HWX2_POPTR) 0.04 Orthogroups_2024-Update
Sopen01g031350 No alias Glycosyl hydrolase family 3 N terminal domain 0.03 Orthogroups_2024-Update
Sopen10g016980 No alias Glycosyl hydrolase family 3 N terminal domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 411 640
IPR001764 Glyco_hydro_3_N 117 366
IPR026891 Fn3-like 710 780
No external refs found!