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  5. Seita.1G332600.1

Seita.1G332600.1


Description : Unknown function


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G332600.1
Cluster HCAA Clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
38500 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
At4g25480 No alias Dehydration-responsive element-binding protein 1A... 0.02 Orthogroups_2024-Update
At5g19790 No alias Ethylene-responsive transcription factor RAP2-11... 0.02 Orthogroups_2024-Update
Brara.A01860.1 No alias subgroup ERF-III transcription factor 0.01 Orthogroups_2024-Update
Brara.B01799.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Brara.C03783.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.H02645.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Glyma.06G290000 No alias erf domain protein 9 0.02 Orthogroups_2024-Update
Glyma.08G145300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G216600 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Glyma.09G242600 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Glyma.10G016500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G110400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G077000 No alias ERF domain protein 12 0.04 Orthogroups_2024-Update
HORVU4Hr1G015350.1 No alias subgroup ERF-III transcription factor 0.01 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g39850 No alias AP2 domain containing protein, expressed 0.01 Orthogroups_2024-Update
MA_10430769g0010 No alias (at5g25810 : 105.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00008357-RA No alias (at5g21960 : 123.0) encodes a member of the DREB... 0.01 Orthogroups_2024-Update
PSME_00037661-RA No alias (at4g17500 : 149.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
Pp1s117_32V6 No alias ap2 domain transcription factor 0.04 Orthogroups_2024-Update
Pp1s6_391V6 No alias ap2 erf domain-containing transcription factor 0.04 Orthogroups_2024-Update
Seita.2G080100.1 No alias subgroup ERF-VII transcription factor & transcription... 0.01 Orthogroups_2024-Update
Seita.3G368800.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.01 Orthogroups_2024-Update
Solyc03g093540 No alias Ethylene-responsive transcription factor 5 (AHRD V3.3... 0.01 Orthogroups_2024-Update
Solyc03g118190 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Solyc05g050830 No alias Ethylene-responsive transcription factor4 0.02 Orthogroups_2024-Update
Sopen08g004160 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen11g007720 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 34 83
No external refs found!