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  5. Seita.1G335000.1

Seita.1G335000.1


Description : atypical PTP phosphatase *(PFA-DSP)


Gene families : OG_42_0001262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001262_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G335000.1
Cluster HCAA Clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G086418 No alias Phosphotyrosine protein phosphatases superfamily protein 0.02 Orthogroups_2024-Update
Potri.011G021100 No alias Phosphotyrosine protein phosphatases superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G304100.1 No alias atypical PTP phosphatase *(PFA-DSP) 0.05 Orthogroups_2024-Update
Sobic.002G142066.1 No alias atypical PTP phosphatase *(PFA-DSP) 0.02 Orthogroups_2024-Update
Solyc11g011970 No alias Tyrosine-protein phosphatase (AHRD V3.3 *** R9Q9C6_FRAVE) 0.02 Orthogroups_2024-Update
Sopen04g025240 No alias Tyrosine phosphatase family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004861 Siw14-like 48 211
No external refs found!