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  5. Seita.1G337100.1

Seita.1G337100.1


Description : manganese cation transporter *(Mn-CDF) & manganese cation transporter *(Mn-CDF)


Gene families : OG_42_0000596 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G337100.1
Cluster HCAA Clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
A4A49_13437 No alias metal tolerance protein 4 0.03 Orthogroups_2024-Update
At3g58060 No alias Cation efflux family protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA 16Dec
MF GO:0008324 cation transmembrane transporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
InterPro domains Description Start Stop
IPR027470 Cation_efflux_CTD 314 388
IPR002524 Cation_efflux 116 307
No external refs found!