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Description : Glycine-rich RNA-binding protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM8]
Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At4g13850 | |
| Cluster | HCCA clusters: Cluster_107 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 81392 | No alias | glycine-rich RNA-binding protein 3 | 0.02 | Orthogroups_2024-Update | |
| A4A49_21370 | No alias | glycine-rich rna-binding protein 2, mitochondrial | 0.05 | Orthogroups_2024-Update | |
| Bradi2g58690 | No alias | glycine-rich RNA-binding protein 4 | 0.02 | Orthogroups_2024-Update | |
| Bradi4g06840 | No alias | glycine-rich RNA-binding protein 3 | 0.03 | Orthogroups_2024-Update | |
| Brara.C04224.1 | No alias | RNA editing factor *(ORRM3) | 0.04 | Orthogroups_2024-Update | |
| Brara.J01355.1 | No alias | Unknown function | 0.07 | Orthogroups_2024-Update | |
| Brara.K01454.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| GRMZM2G113513 | No alias | RNA binding (RRM/RBD/RNP motifs) family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.03G172300 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G263200 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G255000 | No alias | glycine-rich RNA-binding protein 2 | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G173200 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.20G113200 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.04 | Orthogroups_2024-Update | |
| HORVU5Hr1G089190.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G073220.1 | No alias | RNA editing factor *(ORRM2) | 0.03 | Orthogroups_2024-Update | |
| LOC_Os10g17454 | No alias | RNA recognition motif containing protein, expressed | 0.05 | Orthogroups_2024-Update | |
| LOC_Os12g43600 | No alias | RNA recognition motif containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| Mp6g08160.1 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.02 | Orthogroups_2024-Update | |
| Potri.001G319800 | No alias | glycine-rich RNA-binding protein 2 | 0.03 | Orthogroups_2024-Update | |
| Potri.001G409800 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s45_280V6 | No alias | glycine-rich rna-binding | 0.03 | Orthogroups_2024-Update | |
| Seita.3G357800.1 | No alias | RNA editing factor *(ORRM3) | 0.03 | Orthogroups_2024-Update | |
| Seita.5G427300.1 | No alias | RNA editing factor *(ORRM3) | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G141300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G401400.1 | No alias | RNA editing factor *(ORRM3) | 0.02 | Orthogroups_2024-Update | |
| Solyc02g088790 | No alias | RNA-binding protein (AHRD V3.3 *** Q941H9_TOBAC) | 0.03 | Orthogroups_2024-Update | |
| Sopen05g032250 | No alias | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 0.04 | Orthogroups_2024-Update | |
| Sopen09g035220 | No alias | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 0.03 | Orthogroups_2024-Update | |
| Sopen10g032720 | No alias | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000105 | histidine biosynthetic process | IEP | Predicted GO |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| BP | GO:0006547 | histidine metabolic process | IEP | Predicted GO |
| BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
| MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predicted GO |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
| MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
| BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 37 | 107 |
| No external refs found! |