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  5. Seita.1G342400.1

Seita.1G342400.1


Description : class-C-III small heat-shock-responsive protein


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G342400.1

Target Alias Description ECC score Gene Family Method Actions
Bradi1g67040 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G106800 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G106700 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os02g54140 No alias hsp20/alpha crystallin family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426614g0010 No alias (at5g59720 : 200.0) encodes a low molecular weight heat... 0.03 Orthogroups_2024-Update
MA_212053g0010 No alias (at5g59720 : 101.0) encodes a low molecular weight heat... 0.02 Orthogroups_2024-Update
Potri.009G004300 No alias 17.6 kDa class II heat shock protein 0.04 Orthogroups_2024-Update
Pp1s372_62V6 No alias 18.5 kDa class I heat shock protein (HSP 18.5) [Glycine max] 0.04 Orthogroups_2024-Update
Pp1s8_244V6 No alias F12M12.200; 17.4 kDa class I heat shock protein... 0.03 Orthogroups_2024-Update
Pp1s8_86V6 No alias 17.4 kDa class I heat shock protein (HSP 17.4)... 0.03 Orthogroups_2024-Update
Solyc09g011710 No alias Class I heat shock protein (AHRD V3.3 *** F4YBC5_SOLNI) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 59 171
No external refs found!