Seita.1G345500.1

Description : Unknown function

Gene families : OG_42_0003759 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003759_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.1G345500.1
Cluster	HCAA Clusters: Cluster_282

Target	Alias	Description	ECC score	Gene Family Method	Actions
HORVU7Hr1G052810.5	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
MF	GO:0008649	rRNA methyltransferase activity	IEP	Predicted GO
MF	GO:0016436	rRNA (uridine) methyltransferase activity	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
CC	GO:0031012	extracellular matrix	IEP	Predicted GO
BP	GO:0031167	rRNA methylation	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
CC	GO:0044421	extracellular region part	IEP	Predicted GO
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IEP	Predicted GO
BP	GO:0070475	rRNA base methylation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR012871	DUF1668_ORYSA	6	125

External Links

No external refs found!