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  5. Seita.1G346800.1

Seita.1G346800.1


Description : solute transporter *(AAAP)


Gene families : OG_42_0000219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G346800.1
Cluster HCAA Clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
80911 No alias Transmembrane amino acid transporter family protein 0.02 Orthogroups_2024-Update
At5g02180 No alias Amino acid transporter AVT1D... 0.03 Orthogroups_2024-Update
Brara.I03740.1 No alias solute transporter *(AAAP) 0.05 Orthogroups_2024-Update
Brara.J02897.1 No alias solute transporter *(AAAP) 0.06 Orthogroups_2024-Update
Glyma.10G208800 No alias Transmembrane amino acid transporter family protein 0.03 Orthogroups_2024-Update
Mp2g13500.1 No alias solute transporter (AAAP) 0.03 Orthogroups_2024-Update
PSME_00031292-RA No alias (at2g39130 : 632.0) Transmembrane amino acid transporter... 0.02 Orthogroups_2024-Update
Sobic.003G207900.2 No alias solute transporter *(AAAP) 0.04 Orthogroups_2024-Update
Sobic.010G146700.1 No alias solute transporter *(AAAP) 0.02 Orthogroups_2024-Update
Sopen05g032440 No alias Transmembrane amino acid transporter protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 131 511
No external refs found!