Seita.1G346900.1

Description : cyclic nucleotide-gated cation channel *(CNGC)

Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.1G346900.1
Cluster	HCAA Clusters: Cluster_179

Target	Alias	Description	ECC score	Gene Family Method
416791	No alias	Cyclic nucleotide-regulated ion channel family protein	0.03	Orthogroups_2024-Update
Bradi1g46260	No alias	cyclic nucleotide-binding transporter 1	0.06	Orthogroups_2024-Update
Brara.E00133.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.02	Orthogroups_2024-Update
GRMZM2G135651	No alias	cyclic nucleotide-gated channel 17	0.04	Orthogroups_2024-Update
GRMZM2G148118	No alias	cyclic nucleotide gated channel 1	0.03	Orthogroups_2024-Update
Potri.014G097900	No alias	cyclic nucleotide gated channel 1	0.03	Orthogroups_2024-Update
evm.model.tig00021244.33	No alias	(at4g30560 : 102.0) member of Cyclic nucleotide gated...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	16Dec

Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO
MF	GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	IEP	Predicted GO
BP	GO:0040008	regulation of growth	IEP	Predicted GO
BP	GO:0045927	positive regulation of growth	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO
MF	GO:1990380	Lys48-specific deubiquitinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	502	589
IPR005821	Ion_trans_dom	83	407

External Links

No external refs found!