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At4g13960


Description : F-box/RNI-like superfamily protein [Source:TAIR;Acc:AT4G13960]


Gene families : OG_42_0000608 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000608_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g13960
Cluster HCCA clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
A4A49_06046 No alias f-boxlrr-repeat protein 0.03 Orthogroups_2024-Update
At3g44080 No alias Putative F-box/LRR-repeat protein At3g44080... 0.04 Orthogroups_2024-Update
At3g58890 No alias RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LXR3] 0.03 Orthogroups_2024-Update
At3g58980 No alias F-box/LRR-repeat protein At3g58980... 0.03 Orthogroups_2024-Update
At3g62440 No alias SAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA18] 0.07 Orthogroups_2024-Update
At5g25860 No alias Putative F-box/LRR-repeat protein At5g25860... 0.04 Orthogroups_2024-Update
Brara.C04106.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D01340.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.D01779.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.G01824.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H00020.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I04124.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 4 39
No external refs found!