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  5. Seita.1G351200.1

Seita.1G351200.1


Description : Unknown function


Gene families : OG_42_0000146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G351200.1
Cluster HCAA Clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
A4A49_09367 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.01 Orthogroups_2024-Update
A4A49_09610 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.01 Orthogroups_2024-Update
At5g27460 No alias Pentatricopeptide repeat-containing protein At5g27460... 0.02 Orthogroups_2024-Update
Bradi2g10850 No alias PENTATRICOPEPTIDE REPEAT 596 0.01 Orthogroups_2024-Update
Glyma.13G336000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os04g46010 No alias PPR repeat domain containing protein, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os12g34340 No alias pentatricopeptide, putative, expressed 0.01 Orthogroups_2024-Update
Potri.006G039600 No alias PENTATRICOPEPTIDE REPEAT 596 0.02 Orthogroups_2024-Update
Potri.013G132700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Sopen02g023200 No alias PPR repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 177 233
IPR002885 Pentatricopeptide_repeat 368 394
IPR002885 Pentatricopeptide_repeat 401 424
No external refs found!