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  5. Seita.1G351300.1

Seita.1G351300.1


Description : subgroup ARR-B transcription factor & B-type ARR response activator of cytokinin signalling


Gene families : OG_42_0000401 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G351300.1
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
A4A49_13098 No alias two-component response regulator orr24 0.04 Orthogroups_2024-Update
Brara.G02726.1 No alias subgroup ARR-B transcription factor & B-type ARR... 0.03 Orthogroups_2024-Update
Brara.K00386.1 No alias subgroup ARR-B transcription factor & B-type ARR... 0.04 Orthogroups_2024-Update
GRMZM2G060485 No alias response regulator 12 0.02 Orthogroups_2024-Update
Glyma.17G030600 No alias response regulator 1 0.05 Orthogroups_2024-Update
Glyma.19G051800 No alias response regulator 1 0.03 Orthogroups_2024-Update
LOC_Os02g08500 No alias two-component response regulator, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00025688-RA No alias (at4g16110 : 251.0) Encodes a pollen-specific... 0.02 Orthogroups_2024-Update
Pp1s16_393V6 No alias type-b response regulator 0.02 Orthogroups_2024-Update
Sobic.003G393300.1 No alias subgroup ARR-B transcription factor & B-type ARR... 0.03 Orthogroups_2024-Update
Sobic.004G066600.1 No alias subgroup ARR-B transcription factor & B-type ARR... 0.04 Orthogroups_2024-Update
Sobic.010G064700.1 No alias subgroup ARR-B transcription factor & B-type ARR... 0.05 Orthogroups_2024-Update
Solyc04g008050 No alias Two-component response regulator (AHRD V3.3 *** W9QMB4_9ROSA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 23 132
IPR001005 SANT/Myb 214 264
No external refs found!