1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.1G351800.1

Seita.1G351800.1


Description : subgroup ERF-V transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G351800.1
Cluster HCAA Clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
A4A49_02884 No alias ethylene-responsive transcription factor 14 0.03 Orthogroups_2024-Update
At1g01250 No alias Ethylene-responsive transcription factor ERF023... 0.04 Orthogroups_2024-Update
At4g11140 No alias Ethylene-responsive transcription factor CRF1... 0.07 Orthogroups_2024-Update
At5g18560 No alias PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3] 0.03 Orthogroups_2024-Update
Bradi1g23756 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Bradi1g57970 No alias C-repeat/DRE binding factor 2 0.02 Orthogroups_2024-Update
Bradi2g04000 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g08790 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g10107 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.D02846.1 No alias subgroup ERF-VII transcription factor & transcription... 0.02 Orthogroups_2024-Update
Brara.H01375.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.01G206700 No alias ethylene responsive element binding factor 5 0.07 Orthogroups_2024-Update
Glyma.09G147200 No alias C-repeat-binding factor 4 0.04 Orthogroups_2024-Update
Glyma.12G103100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G015350.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G080340.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os09g39850 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.008G073600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Sobic.004G331300.2 No alias subgroup ERF-V transcription factor 0.04 Orthogroups_2024-Update
Solyc02g077360 No alias Ethylene Response Factor B.2 0.04 Orthogroups_2024-Update
Sopen06g024300 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 7 56
No external refs found!