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  5. Seita.1G352400.1

Seita.1G352400.1


Description : Unknown function


Gene families : OG_42_0000405 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G352400.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
At4g12650 No alias Transmembrane 9 superfamily member... 0.03 Orthogroups_2024-Update
Bradi1g37590 No alias transmembrane nine 7 0.05 Orthogroups_2024-Update
Bradi3g54220 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
Bradi3g56610 No alias Endomembrane protein 70 protein family 0.04 Orthogroups_2024-Update
Bradi4g37690 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
Brara.B00381.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C00442.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D00756.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.J02276.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Cre10.g439850 No alias transmembrane nine 7 0.05 Orthogroups_2024-Update
Cre12.g494350 No alias Endomembrane protein 70 protein family 0.04 Orthogroups_2024-Update
Glyma.04G060700 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
Glyma.06G061300 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
Glyma.07G010300 No alias transmembrane nine 7 0.06 Orthogroups_2024-Update
Glyma.08G193400 No alias transmembrane nine 7 0.04 Orthogroups_2024-Update
Glyma.13G156800 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
Glyma.14G003500 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
Glyma.14G102000 No alias Endomembrane protein 70 protein family 0.04 Orthogroups_2024-Update
Kfl00519_0100 kfl00519_0100_v1.1 (at3g13772 : 894.0) Encodes an Arabidopsis Transmembrane... 0.04 Orthogroups_2024-Update
LOC_Os09g38530 No alias transmembrane 9 superfamily member, putative, expressed 0.03 Orthogroups_2024-Update
MA_177756g0010 No alias (at3g13772 : 936.0) Encodes an Arabidopsis Transmembrane... 0.04 Orthogroups_2024-Update
MA_83018g0010 No alias (at3g13772 : 667.0) Encodes an Arabidopsis Transmembrane... 0.03 Orthogroups_2024-Update
PSME_00006153-RA No alias (at3g13772 : 934.0) Encodes an Arabidopsis Transmembrane... 0.04 Orthogroups_2024-Update
PSME_00033866-RA No alias (at3g13772 : 966.0) Encodes an Arabidopsis Transmembrane... 0.03 Orthogroups_2024-Update
Pp1s137_209V6 No alias endosomal p24a protein 0.04 Orthogroups_2024-Update
Pp1s24_182V6 No alias endosomal p24a protein 0.02 Orthogroups_2024-Update
Pp1s60_227V6 No alias endosomal p24a protein 0.04 Orthogroups_2024-Update
Pp1s6_147V6 No alias endosomal p24a protein 0.02 Orthogroups_2024-Update
Pp1s73_94V6 No alias MMM17.22; endomembrane protein 70, putative [Arabidopsis... 0.03 Orthogroups_2024-Update
Pp1s83_105V6 No alias endosomal p24a protein 0.05 Orthogroups_2024-Update
Sobic.002G294200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G257000.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.004G257100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G331900.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.007G173000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G172400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g121570 No alias Transmembrane 9 superfamily member (AHRD V3.3 *** M0ZRA0_SOLTU) 0.03 Orthogroups_2024-Update
Solyc08g006820 No alias Transmembrane 9 superfamily member (AHRD V3.3 *** M1CHH8_SOLTU) 0.02 Orthogroups_2024-Update
Sopen07g029410 No alias Endomembrane protein 70 0.02 Orthogroups_2024-Update
Sopen12g005400 No alias Endomembrane protein 70 0.02 Orthogroups_2024-Update
evm.model.contig_444.14 No alias (at3g13772 : 464.0) Encodes an Arabidopsis Transmembrane... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
CC GO:0000502 proteasome complex IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
MF GO:0005047 signal recognition particle binding IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005785 signal recognition particle receptor complex IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019211 phosphatase activator activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004240 EMP70 59 614
No external refs found!